Design and analysis of progress curves in enzyme kinetics.
نویسندگان
چکیده
Lastly, I wish to illustrate and to stress the necessity of assessing goodness of fit by making use of several tests and not relying on only one or two such tests. Referring to Table 1, the xz test and the Runs test indicate that model 3 is a good fit, whereas the curved Rankits plot, the slow convergence, the non-linearity at the minimum sum of squares and the wide range of the coefficients of variation for the parameters cast doubt on the fit. The model must, however, be rejected because one of the terms in the model contributes little to the model. For model 1, the parameter values and their S.D. values, the convergence and the xz test indicate a good fit. However, the Rankits plot and the sum-of-squares surface suggests some doubt and the Runs test especially means that the model is very doubtful. The tests on model 2 are all satisfactory apart from the Runs test. Hence by assessing a wide variety of evidence one can conclude that Model 2 is a good model and the other two are in several ways less satisfactory. In conclusion: (1) before it can be accepted that a given model is a good description of a particular system, sufficient statistical evidence must be presented ; (2) one or two tests on the fit of a model are often insufficient; as many tests as possible must be used.
منابع مشابه
Progress-curve analysis in enzyme kinetics. Numerical solution of integrated rate equations.
Progress curves of enzyme-catalysed reactions are described by equations of a type that precludes direct calculation of the extent of reaction at any time. Previously, such equations have been solved by the Newton-Raphson method, but this procedure may fail when based upon the usual formulae. An alternative formulation is proposed that is both quicker and more robust.
متن کاملRapid Mechanistic Evaluation and Parameter Estimation of Putative Inhibitors in a Single-Step Progress-Curve Analysis: The Case of Horse Butyrylcholinesterase.
Highly efficient and rapid lead compound evaluation for estimation of inhibition parameters and type of inhibition is proposed. This is based on a single progress-curve measurement in the presence of each candidate compound, followed by the simultaneous analysis of all of these curves using the ENZO enzyme kinetics suite, which can be implemented as a web application. In the first step, all of ...
متن کاملAnalysis of progress curves for enzyme-catalyzed reactions: application to unstable enzymes, coupled reactions and transient-state kinetics.
There are several advantages to the use of progress curves to analyze the the kinetic properties of enzymes but most studies still rely on rate measurements. One of the reasons for this may be that progress curve analysis relies on the enzyme and the reactants being completely stable under assay conditions. Here a method is described that relaxes this requirement and allows progress curve analy...
متن کاملKinetics analysis of electrophoretic deposition using small signal and large signal modeling, Case study: Nano-Mullite suspension
Having sufficient and accurate understanding about kinetics of phenomena, could be an important reason for further technological progresses. Finding a white-box mathematical model for weight vs. time curves of Electrophoretic Deposition (EPD) using large and small signal analysis has been studied thoroughly in the present investigation. Weight-Time curves of nano-Mullite suspension have been tr...
متن کاملAnalysis of progress curves in enzyme kinetics.
Since Michaelis & Menten (1913) demonstrated that many of the problems encountered by earlier workers in enzyme kinetics could be avoided by measuring initial rates and using kinetic equations in their differential forms, most biochemists have been reluctant to use integrated rate equations. However, confining analysis to the initial linear part of a progress curve wastes much of the available ...
متن کاملAnalytical Solution of Steady State Substrate Concentration of an Immobilized Enzyme Kinetics by Laplace Transform Homotopy Perturbation Method
The nonlinear dynamical system modeling the immobilized enzyme kinetics with Michaelis-Menten mechanism for an irreversible reaction without external mass transfer resistance is considered. Laplace transform homotopy perturbation method is used to obtain the approximate solution of the governing nonlinear differential equation, which consists in determining the series solution convergent to the...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Biochemical Society transactions
دوره 4 2 شماره
صفحات -
تاریخ انتشار 1976